Cluster: HRGMv2_2727_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2727
- CGC Family ID: CGCFAM_00047
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_255 | 270045 | 271430 | - | 2.A.25.1.5 |
| NULL(UNKNOWN) | HRGMv2_2727_3 | HRGMv2_2727_3_256 | 271688 | 272230 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_257 | 272227 | 273093 | - | 3.A.1.1.48 |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_258 | 273093 | 274049 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | HRGMv2_2727_3 | HRGMv2_2727_3_259 | 274151 | 275593 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2727_3 | HRGMv2_2727_3_260 | 275678 | 276694 | - | LacI |
| CAZyme | HRGMv2_2727_3 | HRGMv2_2727_3_261 | 277285 | 279720 | + | GH94 |
Gene ID: HRGMv2_2727_3_255
Type: TC
Location: 270045 - 271430 (-)
Type: TC
Location: 270045 - 271430 (-)
Gene ID: HRGMv2_2727_3_256
Type:
Location: 271688 - 272230 (+)
Type:
Location: 271688 - 272230 (+)
Gene ID: HRGMv2_2727_3_257
Type: TC
Location: 272227 - 273093 (-)
Type: TC
Location: 272227 - 273093 (-)
Gene ID: HRGMv2_2727_3_258
Type: TC
Location: 273093 - 274049 (-)
Type: TC
Location: 273093 - 274049 (-)
Gene ID: HRGMv2_2727_3_259
Type:
Location: 274151 - 275593 (-)
Type:
Location: 274151 - 275593 (-)
Gene ID: HRGMv2_2727_3_260
Type: TF
Location: 275678 - 276694 (-)
Type: TF
Location: 275678 - 276694 (-)
Gene ID: HRGMv2_2727_3_261
Type: CAZyme
Location: 277285 - 279720 (+)
Type: CAZyme
Location: 277285 - 279720 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.