Cluster: HRGMv2_2727_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2727
- CGC Family ID: CGCFAM_00159
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_318 | 348568 | 349566 | - | 3.A.1.2.3 |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_319 | 349585 | 351126 | - | 3.A.1.2.3 |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_320 | 351287 | 352333 | - | 3.A.1.2.3 |
| TF | HRGMv2_2727_3 | HRGMv2_2727_3_321 | 352722 | 353924 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_322 | 354077 | 355468 | - | 2.A.2.3.1 |
| CAZyme | HRGMv2_2727_3 | HRGMv2_2727_3_323 | 356054 | 357880 | + | GH2 |
Gene ID: HRGMv2_2727_3_318
Type: TC
Location: 348568 - 349566 (-)
Type: TC
Location: 348568 - 349566 (-)
Gene ID: HRGMv2_2727_3_319
Type: TC
Location: 349585 - 351126 (-)
Type: TC
Location: 349585 - 351126 (-)
Gene ID: HRGMv2_2727_3_320
Type: TC
Location: 351287 - 352333 (-)
Type: TC
Location: 351287 - 352333 (-)
Gene ID: HRGMv2_2727_3_321
Type: TF
Location: 352722 - 353924 (-)
Type: TF
Location: 352722 - 353924 (-)
Gene ID: HRGMv2_2727_3_322
Type: TC
Location: 354077 - 355468 (-)
Type: TC
Location: 354077 - 355468 (-)
Gene ID: HRGMv2_2727_3_323
Type: CAZyme
Location: 356054 - 357880 (+)
Type: CAZyme
Location: 356054 - 357880 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.