Cluster: HRGMv2_2727_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2727
- CGC Family ID: CGCFAM_00662
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2727_1 | HRGMv2_2727_1_906 | 1022377 | 1023753 | - | 2.A.66.1.32 |
| CAZyme | HRGMv2_2727_1 | HRGMv2_2727_1_907 | 1023817 | 1026060 | - | GH3 |
| TC | HRGMv2_2727_1 | HRGMv2_2727_1_908 | 1026453 | 1027970 | + | 2.A.2.1.1 |
| pfam | HRGMv2_2727_1 | HRGMv2_2727_1_909 | 1028091 | 1028384 | + | TM2 |
| NULL(UNKNOWN) | HRGMv2_2727_1 | HRGMv2_2727_1_910 | 1028433 | 1028627 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2727_1 | HRGMv2_2727_1_911 | 1029033 | 1031279 | - | GH2 |
Gene ID: HRGMv2_2727_1_906
Type: TC
Location: 1022377 - 1023753 (-)
Type: TC
Location: 1022377 - 1023753 (-)
Gene ID: HRGMv2_2727_1_907
Type: CAZyme
Location: 1023817 - 1026060 (-)
Type: CAZyme
Location: 1023817 - 1026060 (-)
Gene ID: HRGMv2_2727_1_908
Type: TC
Location: 1026453 - 1027970 (+)
Type: TC
Location: 1026453 - 1027970 (+)
Gene ID: HRGMv2_2727_1_909
Type: pfam
Location: 1028091 - 1028384 (+)
Type: pfam
Location: 1028091 - 1028384 (+)
Gene ID: HRGMv2_2727_1_910
Type:
Location: 1028433 - 1028627 (+)
Type:
Location: 1028433 - 1028627 (+)
Gene ID: HRGMv2_2727_1_911
Type: CAZyme
Location: 1029033 - 1031279 (-)
Type: CAZyme
Location: 1029033 - 1031279 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.