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Cluster: HRGMv2_2727_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2727_1 HRGMv2_2727_1_574 630490 631608 + GT4
TC HRGMv2_2727_1 HRGMv2_2727_1_575 631654 633237 - 2.A.16.2.2
CAZyme HRGMv2_2727_1 HRGMv2_2727_1_576 633470 634495 + GT2
TC HRGMv2_2727_1 HRGMv2_2727_1_577 634761 636062 + 2.A.37.3.3
pfam HRGMv2_2727_1 HRGMv2_2727_1_578 636102 636638 - DUF5662
CAZyme HRGMv2_2727_1 HRGMv2_2727_1_579 636635 638521 - GT2 | GT2
TC HRGMv2_2727_1 HRGMv2_2727_1_580 638525 639268 - 3.A.1.103.1
TC HRGMv2_2727_1 HRGMv2_2727_1_581 639281 640072 - 3.A.1.103.6
Gene ID: HRGMv2_2727_1_574
Type: CAZyme
Location: 630490 - 631608 (+)
Gene ID: HRGMv2_2727_1_575
Type: TC
Location: 631654 - 633237 (-)
Gene ID: HRGMv2_2727_1_576
Type: CAZyme
Location: 633470 - 634495 (+)
Gene ID: HRGMv2_2727_1_577
Type: TC
Location: 634761 - 636062 (+)
Gene ID: HRGMv2_2727_1_578
Type: pfam
Location: 636102 - 636638 (-)
Gene ID: HRGMv2_2727_1_579
Type: CAZyme
Location: 636635 - 638521 (-)
Gene ID: HRGMv2_2727_1_580
Type: TC
Location: 638525 - 639268 (-)
Gene ID: HRGMv2_2727_1_581
Type: TC
Location: 639281 - 640072 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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