Cluster: HRGMv2_2727_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2727
- CGC Family ID: CGCFAM_00507
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2727_1 | HRGMv2_2727_1_777 | 860362 | 861879 | - | 2.A.21.2.3 |
| pfam | HRGMv2_2727_1 | HRGMv2_2727_1_778 | 862167 | 862721 | - | GtrA_DPMS_TM |
| CAZyme | HRGMv2_2727_1 | HRGMv2_2727_1_779 | 862737 | 865154 | - | GH3 |
| CAZyme | HRGMv2_2727_1 | HRGMv2_2727_1_780 | 865231 | 868305 | - | GH3 |
Gene ID: HRGMv2_2727_1_777
Type: TC
Location: 860362 - 861879 (-)
Type: TC
Location: 860362 - 861879 (-)
Gene ID: HRGMv2_2727_1_778
Type: pfam
Location: 862167 - 862721 (-)
Type: pfam
Location: 862167 - 862721 (-)
Gene ID: HRGMv2_2727_1_779
Type: CAZyme
Location: 862737 - 865154 (-)
Type: CAZyme
Location: 862737 - 865154 (-)
Gene ID: HRGMv2_2727_1_780
Type: CAZyme
Location: 865231 - 868305 (-)
Type: CAZyme
Location: 865231 - 868305 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.