Cluster: HRGMv2_2727_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2727
- CGC Family ID: CGCFAM_00092
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2727_2 | HRGMv2_2727_2_284 | 296967 | 297851 | + | 3.A.1.1.18 |
| TC | HRGMv2_2727_2 | HRGMv2_2727_2_285 | 297864 | 298760 | + | 3.A.1.1.25 |
| pfam | HRGMv2_2727_2 | HRGMv2_2727_2_286 | 298772 | 298963 | + | DUF6903 |
| CAZyme | HRGMv2_2727_2 | HRGMv2_2727_2_287 | 298982 | 301141 | + | GH112 |
| NULL(UNKNOWN) | HRGMv2_2727_2 | HRGMv2_2727_2_288 | 301268 | 301372 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2727_2 | HRGMv2_2727_2_289 | 301372 | 304455 | - | GH2 |
| TC | HRGMv2_2727_2 | HRGMv2_2727_2_290 | 304570 | 305940 | - | 2.A.2.3.4 |
Gene ID: HRGMv2_2727_2_284
Type: TC
Location: 296967 - 297851 (+)
Type: TC
Location: 296967 - 297851 (+)
Gene ID: HRGMv2_2727_2_285
Type: TC
Location: 297864 - 298760 (+)
Type: TC
Location: 297864 - 298760 (+)
Gene ID: HRGMv2_2727_2_286
Type: pfam
Location: 298772 - 298963 (+)
Type: pfam
Location: 298772 - 298963 (+)
Gene ID: HRGMv2_2727_2_287
Type: CAZyme
Location: 298982 - 301141 (+)
Type: CAZyme
Location: 298982 - 301141 (+)
Gene ID: HRGMv2_2727_2_288
Type:
Location: 301268 - 301372 (-)
Type:
Location: 301268 - 301372 (-)
Gene ID: HRGMv2_2727_2_289
Type: CAZyme
Location: 301372 - 304455 (-)
Type: CAZyme
Location: 301372 - 304455 (-)
Gene ID: HRGMv2_2727_2_290
Type: TC
Location: 304570 - 305940 (-)
Type: TC
Location: 304570 - 305940 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.