Cluster: HRGMv2_2727_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2727
- CGC Family ID: CGCFAM_04449
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2727_1 | HRGMv2_2727_1_678 | 748091 | 748678 | + | CBM13 |
| STP | HRGMv2_2727_1 | HRGMv2_2727_1_679 | 748853 | 749374 | + | NUDIX |
| TC | HRGMv2_2727_1 | HRGMv2_2727_1_680 | 749463 | 750521 | - | 9.A.23.1.1 |
| CAZyme | HRGMv2_2727_1 | HRGMv2_2727_1_681 | 750880 | 752454 | + | GH25 |
| pfam | HRGMv2_2727_1 | HRGMv2_2727_1_682 | 752517 | 753689 | - | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | HRGMv2_2727_1 | HRGMv2_2727_1_683 | 753946 | 755775 | - | 1.A.33.1.4 |
Gene ID: HRGMv2_2727_1_678
Type: CAZyme
Location: 748091 - 748678 (+)
Type: CAZyme
Location: 748091 - 748678 (+)
Gene ID: HRGMv2_2727_1_679
Type: STP
Location: 748853 - 749374 (+)
Type: STP
Location: 748853 - 749374 (+)
Gene ID: HRGMv2_2727_1_680
Type: TC
Location: 749463 - 750521 (-)
Type: TC
Location: 749463 - 750521 (-)
Gene ID: HRGMv2_2727_1_681
Type: CAZyme
Location: 750880 - 752454 (+)
Type: CAZyme
Location: 750880 - 752454 (+)
Gene ID: HRGMv2_2727_1_682
Type: pfam
Location: 752517 - 753689 (-)
Type: pfam
Location: 752517 - 753689 (-)
Gene ID: HRGMv2_2727_1_683
Type: TC
Location: 753946 - 755775 (-)
Type: TC
Location: 753946 - 755775 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.