Genome Details
Selected Rep_genome_ID: HRGMv2_2222
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH128_65 | 2,994,870 | 99.26% | 0.77% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2222 | 2,649,322 | 98.61% | 0.483% | Cameroon | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2222_CGC27 | CGCFAM_00045 | Yes | 9 | 2 | alpha-glucan |
| HRGMv2_2222_CGC20 | CGCFAM_00054 | Yes | 4 | 2 | |
| HRGMv2_2222_CGC23 | CGCFAM_00091 | Yes | 6 | 3 | |
| HRGMv2_2222_CGC25 | CGCFAM_00106 | Yes | 6 | 2 | alpha-glucan |
| HRGMv2_2222_CGC9 | CGCFAM_00149 | Yes | 5 | 1 | |
| HRGMv2_2222_CGC24 | CGCFAM_00283 | Yes | 19 | 6 | |
| HRGMv2_2222_CGC6 | CGCFAM_00411 | Yes | 4 | 1 | |
| HRGMv2_2222_CGC15 | CGCFAM_00450 | Yes | 5 | 1 | |
| HRGMv2_2222_CGC26 | CGCFAM_00650 | Yes | 5 | 1 | |
| HRGMv2_2222_CGC29 | CGCFAM_00938 | Yes | 8 | 1 | galactan |
| HRGMv2_2222_CGC19 | CGCFAM_01044 | Yes | 5 | 2 | |
| HRGMv2_2222_CGC21 | CGCFAM_01895 | Yes | 9 | 2 | |
| HRGMv2_2222_CGC2 | CGCFAM_02117 | Yes | 8 | 2 | |
| HRGMv2_2222_CGC4 | CGCFAM_02656 | Yes | 11 | 6 |
Top CAZyme Families