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Cluster: HRGMv2_2222_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2222_4 HRGMv2_2222_4_21 22053 22691 - 9.B.28.1.2
pfam HRGMv2_2222_4 HRGMv2_2222_4_22 22783 24501 - SBP_bac_8
TC HRGMv2_2222_4 HRGMv2_2222_4_23 24560 25525 - 3.A.1.1.29
TC HRGMv2_2222_4 HRGMv2_2222_4_24 25538 26989 - 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_2222_4 HRGMv2_2222_4_25 27180 29087 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2222_4 HRGMv2_2222_4_26 29264 31045 - 8.A.59.2.1
CAZyme HRGMv2_2222_4 HRGMv2_2222_4_27 31042 32541 - CBM91 | GH43_12
CAZyme HRGMv2_2222_4 HRGMv2_2222_4_28 32623 34104 - GH29
Gene ID: HRGMv2_2222_4_21
Type: TC
Location: 22053 - 22691 (-)
Gene ID: HRGMv2_2222_4_22
Type: pfam
Location: 22783 - 24501 (-)
Gene ID: HRGMv2_2222_4_23
Type: TC
Location: 24560 - 25525 (-)
Gene ID: HRGMv2_2222_4_24
Type: TC
Location: 25538 - 26989 (-)
Gene ID: HRGMv2_2222_4_25
Type:
Location: 27180 - 29087 (-)
Gene ID: HRGMv2_2222_4_26
Type: TC
Location: 29264 - 31045 (-)
Gene ID: HRGMv2_2222_4_27
Type: CAZyme
Location: 31042 - 32541 (-)
Gene ID: HRGMv2_2222_4_28
Type: CAZyme
Location: 32623 - 34104 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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