Cluster: HRGMv2_2222_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2222
- CGC Family ID: CGCFAM_01044
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2222_24 | HRGMv2_2222_24_9 | 9468 | 10985 | - | GH77 |
| TC | HRGMv2_2222_24 | HRGMv2_2222_24_10 | 11139 | 12398 | + | 2.A.49.9.2 |
| CAZyme | HRGMv2_2222_24 | HRGMv2_2222_24_11 | 12395 | 14326 | - | GH13_14 |
| NULL(UNKNOWN) | HRGMv2_2222_24 | HRGMv2_2222_24_12 | 14472 | 15644 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2222_24 | HRGMv2_2222_24_13 | 15675 | 16238 | - | 3.A.1.25.5 |
Gene ID: HRGMv2_2222_24_9
Type: CAZyme
Location: 9468 - 10985 (-)
Type: CAZyme
Location: 9468 - 10985 (-)
Gene ID: HRGMv2_2222_24_10
Type: TC
Location: 11139 - 12398 (+)
Type: TC
Location: 11139 - 12398 (+)
Gene ID: HRGMv2_2222_24_11
Type: CAZyme
Location: 12395 - 14326 (-)
Type: CAZyme
Location: 12395 - 14326 (-)
Gene ID: HRGMv2_2222_24_12
Type:
Location: 14472 - 15644 (-)
Type:
Location: 14472 - 15644 (-)
Gene ID: HRGMv2_2222_24_13
Type: TC
Location: 15675 - 16238 (-)
Type: TC
Location: 15675 - 16238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.