Cluster: HRGMv2_2222_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2222
- CGC Family ID: CGCFAM_00149
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2222_10 | HRGMv2_2222_10_62 | 59991 | 60656 | + | 9.B.104.1.3 |
| pfam | HRGMv2_2222_10 | HRGMv2_2222_10_63 | 60728 | 61720 | + | SCP2 |
| TC | HRGMv2_2222_10 | HRGMv2_2222_10_64 | 61721 | 62362 | - | 2.A.21.9.1 |
| pfam | HRGMv2_2222_10 | HRGMv2_2222_10_65 | 62438 | 62854 | + | HIT | DcpS_C |
| CAZyme | HRGMv2_2222_10 | HRGMv2_2222_10_66 | 62919 | 63986 | - | GT28 |
Gene ID: HRGMv2_2222_10_62
Type: TC
Location: 59991 - 60656 (+)
Type: TC
Location: 59991 - 60656 (+)
Gene ID: HRGMv2_2222_10_63
Type: pfam
Location: 60728 - 61720 (+)
Type: pfam
Location: 60728 - 61720 (+)
Gene ID: HRGMv2_2222_10_64
Type: TC
Location: 61721 - 62362 (-)
Type: TC
Location: 61721 - 62362 (-)
Gene ID: HRGMv2_2222_10_65
Type: pfam
Location: 62438 - 62854 (+)
Type: pfam
Location: 62438 - 62854 (+)
Gene ID: HRGMv2_2222_10_66
Type: CAZyme
Location: 62919 - 63986 (-)
Type: CAZyme
Location: 62919 - 63986 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.