dbCAN Logo

Cluster: HRGMv2_2222_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2222_25 HRGMv2_2222_25_11 11097 13142 + 1.B.52.2.1
CAZyme HRGMv2_2222_25 HRGMv2_2222_25_12 13182 15878 + GH94
CAZyme HRGMv2_2222_25 HRGMv2_2222_25_13 15892 19020 + GH161
STP HRGMv2_2222_25 HRGMv2_2222_25_14 19145 20587 + SBP_bac_1
NULL(UNKNOWN) HRGMv2_2222_25 HRGMv2_2222_25_15 20532 20696 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2222_25 HRGMv2_2222_25_16 20665 21597 + 3.A.1.1.36
TC HRGMv2_2222_25 HRGMv2_2222_25_17 21601 22434 + 3.A.1.1.20
STP HRGMv2_2222_25 HRGMv2_2222_25_18 22572 24185 + SBP_bac_1
TC HRGMv2_2222_25 HRGMv2_2222_25_19 24190 26010 + 8.A.59.2.1
Gene ID: HRGMv2_2222_25_11
Type: TC
Location: 11097 - 13142 (+)
Gene ID: HRGMv2_2222_25_12
Type: CAZyme
Location: 13182 - 15878 (+)
Gene ID: HRGMv2_2222_25_13
Type: CAZyme
Location: 15892 - 19020 (+)
Gene ID: HRGMv2_2222_25_14
Type: STP
Location: 19145 - 20587 (+)
Gene ID: HRGMv2_2222_25_15
Type:
Location: 20532 - 20696 (+)
Gene ID: HRGMv2_2222_25_16
Type: TC
Location: 20665 - 21597 (+)
Gene ID: HRGMv2_2222_25_17
Type: TC
Location: 21601 - 22434 (+)
Gene ID: HRGMv2_2222_25_18
Type: STP
Location: 22572 - 24185 (+)
Gene ID: HRGMv2_2222_25_19
Type: TC
Location: 24190 - 26010 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List