Cluster: HRGMv2_2222_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2222
- CGC Family ID: CGCFAM_00411
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2222_7 | HRGMv2_2222_7_35 | 36826 | 37674 | + | 9.A.40.2.2 |
| peptidase | HRGMv2_2222_7 | HRGMv2_2222_7_36 | 37760 | 38488 | + | M20.UNW |
| CAZyme | HRGMv2_2222_7 | HRGMv2_2222_7_37 | 38529 | 39980 | + | GT5 |
| TC | HRGMv2_2222_7 | HRGMv2_2222_7_38 | 40034 | 42733 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_2222_7_35
Type: TC
Location: 36826 - 37674 (+)
Type: TC
Location: 36826 - 37674 (+)
Gene ID: HRGMv2_2222_7_36
Type: peptidase
Location: 37760 - 38488 (+)
Type: peptidase
Location: 37760 - 38488 (+)
Gene ID: HRGMv2_2222_7_37
Type: CAZyme
Location: 38529 - 39980 (+)
Type: CAZyme
Location: 38529 - 39980 (+)
Gene ID: HRGMv2_2222_7_38
Type: TC
Location: 40034 - 42733 (+)
Type: TC
Location: 40034 - 42733 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.