Cluster: HRGMv2_2222_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2222
- CGC Family ID: CGCFAM_00054
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2222_24 | HRGMv2_2222_24_22 | 24317 | 26728 | - | GH3 |
| pfam | HRGMv2_2222_24 | HRGMv2_2222_24_23 | 26821 | 27396 | - | TK |
| CAZyme | HRGMv2_2222_24 | HRGMv2_2222_24_24 | 27409 | 29808 | - | GH36 |
| TC | HRGMv2_2222_24 | HRGMv2_2222_24_25 | 29878 | 31290 | - | 2.A.2.1.1 |
Gene ID: HRGMv2_2222_24_22
Type: CAZyme
Location: 24317 - 26728 (-)
Type: CAZyme
Location: 24317 - 26728 (-)
Gene ID: HRGMv2_2222_24_23
Type: pfam
Location: 26821 - 27396 (-)
Type: pfam
Location: 26821 - 27396 (-)
Gene ID: HRGMv2_2222_24_24
Type: CAZyme
Location: 27409 - 29808 (-)
Type: CAZyme
Location: 27409 - 29808 (-)
Gene ID: HRGMv2_2222_24_25
Type: TC
Location: 29878 - 31290 (-)
Type: TC
Location: 29878 - 31290 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.