Genome Details
Selected Rep_genome_ID: HRGMv2_2107
Total Genomes Found: 17
Total Genomes Found: 17
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus ammoniilyticus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR053935 | 2,525,582 | 99.33% | 0% | China | Asia | CGMR |
| GCA_021624125.1_ASM2162412v1_genomic | 2,423,198 | 96.31% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021624985.1_ASM2162498v1_genomic | 3,989,971 | 98.08% | 0.95% | NA | Africa | H3AfricaPhase1 |
| GCA_021629365.1_ASM2162936v1_genomic | 2,750,801 | 99.33% | 0.02% | NA | Africa | H3AfricaPhase1 |
| GCA_021637225.1_ASM2163722v1_genomic | 2,574,972 | 96.64% | 0% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2107 | 2,692,848 | 99.32% | 0% | NA | NA | HRGM |
| KY181_bin.13 | 2,753,895 | 99.33% | 0% | NA | Africa | H3AfricaPhase2 |
| SPMP16_bin.104 | 2,589,210 | 97.32% | 0% | Singapore | Asia | SPMP |
| SPMP26_bin.3 | 2,649,326 | 99.16% | 0% | Singapore | Asia | SPMP |
| SPMP44_bin.116 | 2,891,686 | 97.32% | 0.67% | Singapore | Asia | SPMP |
| SPMP49_bin.23 | 2,769,592 | 99.11% | 0% | Singapore | Asia | SPMP |
| SPMP52_bin.87 | 2,843,829 | 98.32% | 0% | Singapore | Asia | SPMP |
| SPMP71_bin.14 | 2,405,494 | 92.95% | 0% | Singapore | Asia | SPMP |
| SPMP74_bin.41 | 2,479,137 | 92.28% | 0% | Singapore | Asia | SPMP |
| SPMP76_bin.25 | 2,573,442 | 97.09% | 0% | Singapore | Asia | SPMP |
| SPMP89_bin.112 | 2,566,309 | 95.3% | 0% | Singapore | Asia | SPMP |
| SPMP99_bin.2 | 2,736,333 | 96.96% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2107_CGC3 | CGCFAM_00050 | Yes | 11 | 5 | |
| HRGMv2_2107_CGC6 | CGCFAM_00053 | Yes | 8 | 1 | |
| HRGMv2_2107_CGC2 | CGCFAM_00237 | Yes | 7 | 1 | |
| HRGMv2_2107_CGC9 | CGCFAM_00414 | Yes | 10 | 1 | |
| HRGMv2_2107_CGC16 | CGCFAM_00816 | Yes | 7 | 1 | |
| HRGMv2_2107_CGC4 | CGCFAM_01344 | Yes | 4 | 1 | |
| HRGMv2_2107_CGC12 | CGCFAM_04037 | Yes | 4 | 1 | |
| HRGMv2_2107_CGC8 | CGCFAM_05012 | Yes | 4 | 1 | |
| HRGMv2_2107_CGC15 | CGCFAM_05739 | Yes | 5 | 1 | |
| HRGMv2_2107_CGC5 | CGCFAM_05894 | Yes | 6 | 1 | |
| HRGMv2_2107_CGC13 | CGCFAM_06096 | Yes | 4 | 1 | |
| HRGMv2_2107_CGC1 | CGCFAM_09340 | Yes | 5 | 1 | |
| HRGMv2_2107_CGC14 | CGCFAM_09960 | Yes | 10 | 3 | |
| HRGMv2_2107_CGC7 | CGCFAM_09961 | Yes | 7 | 1 |
Top CAZyme Families