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Cluster: HRGMv2_2107_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2107_1 HRGMv2_2107_1_151 192113 193414 + 3.D.10.1.4
pfam HRGMv2_2107_1 HRGMv2_2107_1_152 193437 194291 + QRPTase_C | QRPTase_N
TF HRGMv2_2107_1 HRGMv2_2107_1_153 194390 194938 + HTH_11
CAZyme HRGMv2_2107_1 HRGMv2_2107_1_154 195136 197124 + GH31_1
TC HRGMv2_2107_1 HRGMv2_2107_1_155 198321 199265 + 2.A.69.3.2
STP HRGMv2_2107_1 HRGMv2_2107_1_156 199392 199904 + SKI
TC HRGMv2_2107_1 HRGMv2_2107_1_157 200280 201821 + 2.A.21.2.5
Gene ID: HRGMv2_2107_1_151
Type: TC
Location: 192113 - 193414 (+)
Gene ID: HRGMv2_2107_1_152
Type: pfam
Location: 193437 - 194291 (+)
Gene ID: HRGMv2_2107_1_153
Type: TF
Location: 194390 - 194938 (+)
Gene ID: HRGMv2_2107_1_154
Type: CAZyme
Location: 195136 - 197124 (+)
Gene ID: HRGMv2_2107_1_155
Type: TC
Location: 198321 - 199265 (+)
Gene ID: HRGMv2_2107_1_156
Type: STP
Location: 199392 - 199904 (+)
Gene ID: HRGMv2_2107_1_157
Type: TC
Location: 200280 - 201821 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2107_1_153 vegan > omnivore 1.07647 0.01722
HRGMv2_2107_1_157 vegetarian > omnivore 1.23277 0.02445

🧭 Explore Read Mapping of CGC

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