Genome Details
Selected Rep_genome_ID: HRGMv2_1919
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C137.bin_50 | 2,242,256 | 90.57% | 0.94% | China(Inner Mongolia) | Asia | IMGG |
| HRGMv2_1919 | 2,249,801 | 98.11% | 0.943% | US | North America | HRGM |
| MGYG000003087 | 2,304,658 | 98.11% | 0.94% | Spain | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1919_CGC4 | CGCFAM_00007 | Yes | 6 | 2 | |
| HRGMv2_1919_CGC17 | CGCFAM_00011 | Yes | 4 | 2 | |
| HRGMv2_1919_CGC18 | CGCFAM_00020 | Yes | 7 | 2 | host glycan/beta-glucan |
| HRGMv2_1919_CGC19 | CGCFAM_00260 | Yes | 4 | 1 | |
| HRGMv2_1919_CGC6 | CGCFAM_00503 | Yes | 6 | 1 | |
| HRGMv2_1919_CGC29 | CGCFAM_00717 | Yes | 5 | 1 | |
| HRGMv2_1919_CGC24 | CGCFAM_00763 | Yes | 4 | 1 | |
| HRGMv2_1919_CGC16 | CGCFAM_00807 | Yes | 3 | 1 | |
| HRGMv2_1919_CGC28 | CGCFAM_01624 | Yes | 6 | 2 | |
| HRGMv2_1919_CGC15 | CGCFAM_01713 | Yes | 3 | 1 | |
| HRGMv2_1919_CGC26 | CGCFAM_03020 | Yes | 4 | 1 | |
| HRGMv2_1919_CGC34 | CGCFAM_04680 | Yes | 4 | 1 | |
| HRGMv2_1919_CGC21 | CGCFAM_06076 | Yes | 3 | 1 | |
| HRGMv2_1919_CGC20 | CGCFAM_07957 | Yes | 6 | 1 | |
| HRGMv2_1919_CGC1 | CGCFAM_09904 | Yes | 4 | 1 | |
| HRGMv2_1919_CGC2 | CGCFAM_09905 | Yes | 6 | 2 | |
| HRGMv2_1919_CGC9 | CGCFAM_09906 | Yes | 15 | 4 |
Top CAZyme Families