Cluster: HRGMv2_1919_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_00503
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1919_5 | HRGMv2_1919_5_11 | 13163 | 15586 | - | GT4 |
| pfam | HRGMv2_1919_5 | HRGMv2_1919_5_12 | 15878 | 16273 | - | CTP_transf_like |
| TC | HRGMv2_1919_5 | HRGMv2_1919_5_13 | 16286 | 17110 | - | 3.A.1.104.2 |
| TC | HRGMv2_1919_5 | HRGMv2_1919_5_14 | 17124 | 17930 | - | 3.A.1.104.1 |
| NULL(UNKNOWN) | HRGMv2_1919_5 | HRGMv2_1919_5_15 | 18097 | 19584 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1919_5 | HRGMv2_1919_5_16 | 19577 | 20251 | - | 3.A.1.134.6 |
Gene ID: HRGMv2_1919_5_11
Type: CAZyme
Location: 13163 - 15586 (-)
Type: CAZyme
Location: 13163 - 15586 (-)
Gene ID: HRGMv2_1919_5_12
Type: pfam
Location: 15878 - 16273 (-)
Type: pfam
Location: 15878 - 16273 (-)
Gene ID: HRGMv2_1919_5_13
Type: TC
Location: 16286 - 17110 (-)
Type: TC
Location: 16286 - 17110 (-)
Gene ID: HRGMv2_1919_5_14
Type: TC
Location: 17124 - 17930 (-)
Type: TC
Location: 17124 - 17930 (-)
Gene ID: HRGMv2_1919_5_15
Type:
Location: 18097 - 19584 (-)
Type:
Location: 18097 - 19584 (-)
Gene ID: HRGMv2_1919_5_16
Type: TC
Location: 19577 - 20251 (-)
Type: TC
Location: 19577 - 20251 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.