Cluster: HRGMv2_1919_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_00020
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1919_17 | HRGMv2_1919_17_38 | 37230 | 38633 | - | GH1 |
| TC | HRGMv2_1919_17 | HRGMv2_1919_17_39 | 38650 | 38928 | - | 4.A.1.2.2 |
| NULL(UNKNOWN) | HRGMv2_1919_17 | HRGMv2_1919_17_40 | 39076 | 39261 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1919_17 | HRGMv2_1919_17_41 | 39258 | 39674 | - | 4.A.1.2.3 |
| pfam | HRGMv2_1919_17 | HRGMv2_1919_17_42 | 39755 | 40066 | - | PRD |
| pfam | HRGMv2_1919_17 | HRGMv2_1919_17_43 | 40096 | 40365 | - | CAT_RBD |
| CAZyme | HRGMv2_1919_17 | HRGMv2_1919_17_44 | 40693 | 45912 | - | CBM32 | GH84 |
Gene ID: HRGMv2_1919_17_38
Type: CAZyme
Location: 37230 - 38633 (-)
Type: CAZyme
Location: 37230 - 38633 (-)
Gene ID: HRGMv2_1919_17_39
Type: TC
Location: 38650 - 38928 (-)
Type: TC
Location: 38650 - 38928 (-)
Gene ID: HRGMv2_1919_17_40
Type:
Location: 39076 - 39261 (-)
Type:
Location: 39076 - 39261 (-)
Gene ID: HRGMv2_1919_17_41
Type: TC
Location: 39258 - 39674 (-)
Type: TC
Location: 39258 - 39674 (-)
Gene ID: HRGMv2_1919_17_42
Type: pfam
Location: 39755 - 40066 (-)
Type: pfam
Location: 39755 - 40066 (-)
Gene ID: HRGMv2_1919_17_43
Type: pfam
Location: 40096 - 40365 (-)
Type: pfam
Location: 40096 - 40365 (-)
Gene ID: HRGMv2_1919_17_44
Type: CAZyme
Location: 40693 - 45912 (-)
Type: CAZyme
Location: 40693 - 45912 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.