Cluster: HRGMv2_1919_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_00011
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1919_15 | HRGMv2_1919_15_40 | 45121 | 46296 | + | GT4 |
| CAZyme | HRGMv2_1919_15 | HRGMv2_1919_15_41 | 46287 | 48368 | + | GT2 |
| TC | HRGMv2_1919_15 | HRGMv2_1919_15_42 | 48365 | 49120 | + | 3.A.1.103.4 |
| TC | HRGMv2_1919_15 | HRGMv2_1919_15_43 | 49134 | 49988 | + | 3.A.1.103.1 |
Gene ID: HRGMv2_1919_15_40
Type: CAZyme
Location: 45121 - 46296 (+)
Type: CAZyme
Location: 45121 - 46296 (+)
Gene ID: HRGMv2_1919_15_41
Type: CAZyme
Location: 46287 - 48368 (+)
Type: CAZyme
Location: 46287 - 48368 (+)
Gene ID: HRGMv2_1919_15_42
Type: TC
Location: 48365 - 49120 (+)
Type: TC
Location: 48365 - 49120 (+)
Gene ID: HRGMv2_1919_15_43
Type: TC
Location: 49134 - 49988 (+)
Type: TC
Location: 49134 - 49988 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.