Cluster: HRGMv2_1919_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_06076
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1919_20 | HRGMv2_1919_20_25 | 25451 | 27310 | + | 4.A.2.1.12 |
| peptidase | HRGMv2_1919_20 | HRGMv2_1919_20_26 | 27566 | 28714 | - | C40.UPW |
| CAZyme | HRGMv2_1919_20 | HRGMv2_1919_20_27 | 28844 | 30700 | - | GT51 |
Gene ID: HRGMv2_1919_20_25
Type: TC
Location: 25451 - 27310 (+)
Type: TC
Location: 25451 - 27310 (+)
Gene ID: HRGMv2_1919_20_26
Type: peptidase
Location: 27566 - 28714 (-)
Type: peptidase
Location: 27566 - 28714 (-)
Gene ID: HRGMv2_1919_20_27
Type: CAZyme
Location: 28844 - 30700 (-)
Type: CAZyme
Location: 28844 - 30700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.