Cluster: HRGMv2_1919_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_09905
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1919_2 | HRGMv2_1919_2_26 | 24560 | 25708 | - | CE9 |
| pfam | HRGMv2_1919_2 | HRGMv2_1919_2_27 | 25895 | 27091 | + | Flavodoxin_1 | Lactamase_B | ODP |
| CAZyme | HRGMv2_1919_2 | HRGMv2_1919_2_28 | 27196 | 28506 | - | GH13_20 |
| pfam | HRGMv2_1919_2 | HRGMv2_1919_2_29 | 28539 | 30701 | - | Big_3_2 | Big_3_3 |
| STP | HRGMv2_1919_2 | HRGMv2_1919_2_30 | 30698 | 32143 | - | Pkinase |
| TC | HRGMv2_1919_2 | HRGMv2_1919_2_31 | 32241 | 33803 | - | 2.A.14.1.2 |
Gene ID: HRGMv2_1919_2_26
Type: CAZyme
Location: 24560 - 25708 (-)
Type: CAZyme
Location: 24560 - 25708 (-)
Gene ID: HRGMv2_1919_2_27
Type: pfam
Location: 25895 - 27091 (+)
Type: pfam
Location: 25895 - 27091 (+)
Gene ID: HRGMv2_1919_2_28
Type: CAZyme
Location: 27196 - 28506 (-)
Type: CAZyme
Location: 27196 - 28506 (-)
Gene ID: HRGMv2_1919_2_29
Type: pfam
Location: 28539 - 30701 (-)
Type: pfam
Location: 28539 - 30701 (-)
Gene ID: HRGMv2_1919_2_30
Type: STP
Location: 30698 - 32143 (-)
Type: STP
Location: 30698 - 32143 (-)
Gene ID: HRGMv2_1919_2_31
Type: TC
Location: 32241 - 33803 (-)
Type: TC
Location: 32241 - 33803 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.