Cluster: HRGMv2_1919_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_04680
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1919_49 | HRGMv2_1919_49_10 | 5048 | 7627 | - | 3.A.1.122.13 |
| pfam | HRGMv2_1919_49 | HRGMv2_1919_49_11 | 7754 | 8218 | - | PNPOx_N |
| TC | HRGMv2_1919_49 | HRGMv2_1919_49_12 | 8232 | 8882 | - | 3.A.1.25.5 |
| CAZyme | HRGMv2_1919_49 | HRGMv2_1919_49_13 | 9206 | 14791 | - | GH2 |
Gene ID: HRGMv2_1919_49_10
Type: TC
Location: 5048 - 7627 (-)
Type: TC
Location: 5048 - 7627 (-)
Gene ID: HRGMv2_1919_49_11
Type: pfam
Location: 7754 - 8218 (-)
Type: pfam
Location: 7754 - 8218 (-)
Gene ID: HRGMv2_1919_49_12
Type: TC
Location: 8232 - 8882 (-)
Type: TC
Location: 8232 - 8882 (-)
Gene ID: HRGMv2_1919_49_13
Type: CAZyme
Location: 9206 - 14791 (-)
Type: CAZyme
Location: 9206 - 14791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.