Cluster: HRGMv2_1919_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_01624
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1919_31 | HRGMv2_1919_31_20 | 16179 | 18329 | - | GH13_11 |
| NULL(UNKNOWN) | HRGMv2_1919_31 | HRGMv2_1919_31_21 | 18393 | 18731 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_1919_31 | HRGMv2_1919_31_22 | 18744 | 19094 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1919_31 | HRGMv2_1919_31_23 | 19760 | 20608 | - | GT8 |
| TC | HRGMv2_1919_31 | HRGMv2_1919_31_24 | 20697 | 22574 | - | 3.A.1.135.5 |
| TC | HRGMv2_1919_31 | HRGMv2_1919_31_25 | 22588 | 24324 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_1919_31_20
Type: CAZyme
Location: 16179 - 18329 (-)
Type: CAZyme
Location: 16179 - 18329 (-)
Gene ID: HRGMv2_1919_31_21
Type:
Location: 18393 - 18731 (-)
Type:
Location: 18393 - 18731 (-)
Gene ID: HRGMv2_1919_31_22
Type:
Location: 18744 - 19094 (-)
Type:
Location: 18744 - 19094 (-)
Gene ID: HRGMv2_1919_31_23
Type: CAZyme
Location: 19760 - 20608 (-)
Type: CAZyme
Location: 19760 - 20608 (-)
Gene ID: HRGMv2_1919_31_24
Type: TC
Location: 20697 - 22574 (-)
Type: TC
Location: 20697 - 22574 (-)
Gene ID: HRGMv2_1919_31_25
Type: TC
Location: 22588 - 24324 (-)
Type: TC
Location: 22588 - 24324 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.