Cluster: HRGMv2_1919_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_09904
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1919_1 | HRGMv2_1919_1_92 | 99342 | 100757 | - | 8.A.3.1.2 |
| TC | HRGMv2_1919_1 | HRGMv2_1919_1_93 | 100741 | 102159 | - | 8.A.3.1.2 |
| NULL(UNKNOWN) | HRGMv2_1919_1 | HRGMv2_1919_1_94 | 102172 | 102993 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1919_1 | HRGMv2_1919_1_95 | 103173 | 108083 | - | GH20 |
Gene ID: HRGMv2_1919_1_92
Type: TC
Location: 99342 - 100757 (-)
Type: TC
Location: 99342 - 100757 (-)
Gene ID: HRGMv2_1919_1_93
Type: TC
Location: 100741 - 102159 (-)
Type: TC
Location: 100741 - 102159 (-)
Gene ID: HRGMv2_1919_1_94
Type:
Location: 102172 - 102993 (-)
Type:
Location: 102172 - 102993 (-)
Gene ID: HRGMv2_1919_1_95
Type: CAZyme
Location: 103173 - 108083 (-)
Type: CAZyme
Location: 103173 - 108083 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.