Cluster: HRGMv2_1919_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_00260
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1919_18 | HRGMv2_1919_18_5 | 4527 | 9164 | - | CBM32 | GH20 |
| pfam | HRGMv2_1919_18 | HRGMv2_1919_18_6 | 9357 | 9710 | - | F5_F8_type_C | F5_F8_type_C_2 |
| pfam | HRGMv2_1919_18 | HRGMv2_1919_18_7 | 10057 | 12591 | - | MutS_V | MutS_I | MutS_II | MutS_IV | MutS_III |
| TC | HRGMv2_1919_18 | HRGMv2_1919_18_8 | 12824 | 14038 | + | 2.A.103.1.2 |
Gene ID: HRGMv2_1919_18_5
Type: CAZyme
Location: 4527 - 9164 (-)
Type: CAZyme
Location: 4527 - 9164 (-)
Gene ID: HRGMv2_1919_18_6
Type: pfam
Location: 9357 - 9710 (-)
Type: pfam
Location: 9357 - 9710 (-)
Gene ID: HRGMv2_1919_18_7
Type: pfam
Location: 10057 - 12591 (-)
Type: pfam
Location: 10057 - 12591 (-)
Gene ID: HRGMv2_1919_18_8
Type: TC
Location: 12824 - 14038 (+)
Type: TC
Location: 12824 - 14038 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.