Cluster: HRGMv2_1919_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_00763
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1919_25 | HRGMv2_1919_25_29 | 25771 | 29916 | + | GH20 |
| TF | HRGMv2_1919_25 | HRGMv2_1919_25_30 | 30070 | 30558 | + | MarR |
| TC | HRGMv2_1919_25 | HRGMv2_1919_25_31 | 30552 | 32834 | + | 3.A.1.135.6 |
| TC | HRGMv2_1919_25 | HRGMv2_1919_25_32 | 32824 | 34689 | + | 3.A.1.135.6 |
Gene ID: HRGMv2_1919_25_29
Type: CAZyme
Location: 25771 - 29916 (+)
Type: CAZyme
Location: 25771 - 29916 (+)
Gene ID: HRGMv2_1919_25_30
Type: TF
Location: 30070 - 30558 (+)
Type: TF
Location: 30070 - 30558 (+)
Gene ID: HRGMv2_1919_25_31
Type: TC
Location: 30552 - 32834 (+)
Type: TC
Location: 30552 - 32834 (+)
Gene ID: HRGMv2_1919_25_32
Type: TC
Location: 32824 - 34689 (+)
Type: TC
Location: 32824 - 34689 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.