Cluster: HRGMv2_1919_CGC9
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_1919
- CGC Family ID: CGCFAM_09906
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1919_7 | HRGMv2_1919_7_44 | 43892 | 44863 | - | 3.A.1.2.4 |
| NULL(UNKNOWN) | HRGMv2_1919_7 | HRGMv2_1919_7_45 | 44958 | 45200 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1919_7 | HRGMv2_1919_7_46 | 45238 | 46068 | - | 4.A.6.1.13 |
| TC | HRGMv2_1919_7 | HRGMv2_1919_7_47 | 46070 | 46906 | - | 4.A.6.1.1 |
| TC | HRGMv2_1919_7 | HRGMv2_1919_7_48 | 46927 | 47418 | - | 4.A.6.1.9 |
| pfam | HRGMv2_1919_7 | HRGMv2_1919_7_49 | 47437 | 47859 | - | EIIA-man |
| pfam | HRGMv2_1919_7 | HRGMv2_1919_7_50 | 48128 | 48973 | + | S6PP | Hydrolase_3 |
| TC | HRGMv2_1919_7 | HRGMv2_1919_7_51 | 48952 | 49707 | - | 3.A.1.34.1 |
| TC | HRGMv2_1919_7 | HRGMv2_1919_7_52 | 49694 | 50572 | - | 3.A.1.34.1 |
| TC | HRGMv2_1919_7 | HRGMv2_1919_7_53 | 50579 | 51565 | - | 3.A.1.34.1 |
| pfam | HRGMv2_1919_7 | HRGMv2_1919_7_54 | 52081 | 53595 | - | IMPDH | CBS | FMN_dh |
| CAZyme | HRGMv2_1919_7 | HRGMv2_1919_7_55 | 53738 | 55852 | - | GH13_14 |
| CAZyme | HRGMv2_1919_7 | HRGMv2_1919_7_56 | 56010 | 61562 | - | CBM32 | CBM32 | CBM32 | GH20 |
| CAZyme | HRGMv2_1919_7 | HRGMv2_1919_7_57 | 61782 | 67172 | - | CBM32 | GH20 |
| CAZyme | HRGMv2_1919_7 | HRGMv2_1919_7_58 | 67423 | 71931 | - | GH136 |
Gene ID: HRGMv2_1919_7_44
Type: TC
Location: 43892 - 44863 (-)
Type: TC
Location: 43892 - 44863 (-)
Gene ID: HRGMv2_1919_7_45
Type:
Location: 44958 - 45200 (-)
Type:
Location: 44958 - 45200 (-)
Gene ID: HRGMv2_1919_7_46
Type: TC
Location: 45238 - 46068 (-)
Type: TC
Location: 45238 - 46068 (-)
Gene ID: HRGMv2_1919_7_47
Type: TC
Location: 46070 - 46906 (-)
Type: TC
Location: 46070 - 46906 (-)
Gene ID: HRGMv2_1919_7_48
Type: TC
Location: 46927 - 47418 (-)
Type: TC
Location: 46927 - 47418 (-)
Gene ID: HRGMv2_1919_7_49
Type: pfam
Location: 47437 - 47859 (-)
Type: pfam
Location: 47437 - 47859 (-)
Gene ID: HRGMv2_1919_7_50
Type: pfam
Location: 48128 - 48973 (+)
Type: pfam
Location: 48128 - 48973 (+)
Gene ID: HRGMv2_1919_7_51
Type: TC
Location: 48952 - 49707 (-)
Type: TC
Location: 48952 - 49707 (-)
Gene ID: HRGMv2_1919_7_52
Type: TC
Location: 49694 - 50572 (-)
Type: TC
Location: 49694 - 50572 (-)
Gene ID: HRGMv2_1919_7_53
Type: TC
Location: 50579 - 51565 (-)
Type: TC
Location: 50579 - 51565 (-)
Gene ID: HRGMv2_1919_7_54
Type: pfam
Location: 52081 - 53595 (-)
Type: pfam
Location: 52081 - 53595 (-)
Gene ID: HRGMv2_1919_7_55
Type: CAZyme
Location: 53738 - 55852 (-)
Type: CAZyme
Location: 53738 - 55852 (-)
Gene ID: HRGMv2_1919_7_56
Type: CAZyme
Location: 56010 - 61562 (-)
Type: CAZyme
Location: 56010 - 61562 (-)
Gene ID: HRGMv2_1919_7_57
Type: CAZyme
Location: 61782 - 67172 (-)
Type: CAZyme
Location: 61782 - 67172 (-)
Gene ID: HRGMv2_1919_7_58
Type: CAZyme
Location: 67423 - 71931 (-)
Type: CAZyme
Location: 67423 - 71931 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.