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Genome Details

Selected Rep_genome_ID: HRGMv2_0429
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900548535
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
BF258_bin.38 2,892,744 90.83% 2.11% NA Africa H3AfricaPhase2
HRGMv2_0429 3,463,175 98.64% 0.957% Tanzania Africa HRGM
MGYG000000553 2,921,999 98.31% 2.53% China Asia UHGG
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_J_10_2310.37 2,850,007 90.99% 0.84% NA Africa Hadza
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0429_CGC39 CGCFAM_00001 Yes 8 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0429_CGC28 CGCFAM_00031 Yes 10 2 pectin/galactan
HRGMv2_0429_CGC25 CGCFAM_00044 Yes 8 2 beta-mannan/xylan/beta-glucan
HRGMv2_0429_CGC17 CGCFAM_00048 Yes 14 4
HRGMv2_0429_CGC7 CGCFAM_00116 Yes 9 3 xylan/beta-glucan
HRGMv2_0429_CGC26 CGCFAM_00146 Yes 6 3
HRGMv2_0429_CGC12 CGCFAM_00186 Yes 12 4
HRGMv2_0429_CGC33 CGCFAM_00197 Yes 6 2
HRGMv2_0429_CGC18 CGCFAM_00225 Yes 7 4 arabinogalactan
HRGMv2_0429_CGC3 CGCFAM_00241 Yes 7 4
HRGMv2_0429_CGC43 CGCFAM_00551 Yes 3 1
HRGMv2_0429_CGC31 CGCFAM_00753 Yes 3 1
HRGMv2_0429_CGC35 CGCFAM_00770 Yes 3 1
PUL0764_HRGMv2_0429_C5 CGCFAM_01240 Yes 3 3 beta-glucan
HRGMv2_0429_CGC5 CGCFAM_01244 Yes 11 5 pectin
HRGMv2_0429_CGC14 CGCFAM_01338 Yes 4 1
HRGMv2_0429_CGC30 CGCFAM_02275 Yes 3 2
HRGMv2_0429_CGC20 CGCFAM_02564 Yes 8 1
HRGMv2_0429_CGC10 CGCFAM_02867 Yes 10 1
HRGMv2_0429_CGC44 CGCFAM_02925 Yes 9 2
HRGMv2_0429_CGC42 CGCFAM_05949 Yes 5 1
HRGMv2_0429_CGC2 CGCFAM_05958 Yes 15 1
HRGMv2_0429_CGC34 CGCFAM_08227 Yes 4 1
HRGMv2_0429_CGC8 CGCFAM_09541 Yes 15 9
HRGMv2_0429_CGC16 CGCFAM_09680 Yes 6 1
Top CAZyme Families