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Cluster: HRGMv2_0429_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0429_2 HRGMv2_0429_2_103 96799 98445 - CBM91 | GH43_12
TF HRGMv2_0429_2 HRGMv2_0429_2_104 98571 102659 - HTH_AraC
CAZyme HRGMv2_0429_2 HRGMv2_0429_2_105 103284 104732 + GH5_21
TC HRGMv2_0429_2 HRGMv2_0429_2_106 104852 107986 + 1.B.14.6.1
pfam HRGMv2_0429_2 HRGMv2_0429_2_107 108001 109902 + SusD_RagB | SusD-like_3
TC HRGMv2_0429_2 HRGMv2_0429_2_108 109920 112724 + 1.B.14.6.1
pfam HRGMv2_0429_2 HRGMv2_0429_2_109 112738 114513 + SusD_RagB | SusD-like_3
pfam HRGMv2_0429_2 HRGMv2_0429_2_110 114547 115668 + BT_3987-like_N | DUF5627
CAZyme HRGMv2_0429_2 HRGMv2_0429_2_111 115684 117432 + GH10
Gene ID: HRGMv2_0429_2_103
Type: CAZyme
Location: 96799 - 98445 (-)
Gene ID: HRGMv2_0429_2_104
Type: TF
Location: 98571 - 102659 (-)
Gene ID: HRGMv2_0429_2_105
Type: CAZyme
Location: 103284 - 104732 (+)
Gene ID: HRGMv2_0429_2_106
Type: TC
Location: 104852 - 107986 (+)
Gene ID: HRGMv2_0429_2_107
Type: pfam
Location: 108001 - 109902 (+)
Gene ID: HRGMv2_0429_2_108
Type: TC
Location: 109920 - 112724 (+)
Gene ID: HRGMv2_0429_2_109
Type: pfam
Location: 112738 - 114513 (+)
Gene ID: HRGMv2_0429_2_110
Type: pfam
Location: 114547 - 115668 (+)
Gene ID: HRGMv2_0429_2_111
Type: CAZyme
Location: 115684 - 117432 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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