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Cluster: HRGMv2_0429_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0429_5 HRGMv2_0429_5_70 66093 68564 - GH127
peptidase HRGMv2_0429_5 HRGMv2_0429_5_71 69001 70548 - M43.UPB
CAZyme HRGMv2_0429_5 HRGMv2_0429_5_72 70716 73127 - CBM32 | GH43_34
CAZyme HRGMv2_0429_5 HRGMv2_0429_5_73 73192 75159 - GH97
CAZyme HRGMv2_0429_5 HRGMv2_0429_5_74 75426 78329 + GH146
TC HRGMv2_0429_5 HRGMv2_0429_5_75 78356 81451 + 1.B.14.6.2
TC HRGMv2_0429_5 HRGMv2_0429_5_76 81482 83197 + 8.A.46.1.4
Gene ID: HRGMv2_0429_5_70
Type: CAZyme
Location: 66093 - 68564 (-)
Gene ID: HRGMv2_0429_5_71
Type: peptidase
Location: 69001 - 70548 (-)
Gene ID: HRGMv2_0429_5_72
Type: CAZyme
Location: 70716 - 73127 (-)
Gene ID: HRGMv2_0429_5_73
Type: CAZyme
Location: 73192 - 75159 (-)
Gene ID: HRGMv2_0429_5_74
Type: CAZyme
Location: 75426 - 78329 (+)
Gene ID: HRGMv2_0429_5_75
Type: TC
Location: 78356 - 81451 (+)
Gene ID: HRGMv2_0429_5_76
Type: TC
Location: 81482 - 83197 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0429_5_74 vegetarian > vegan 1.07503 0.00567

🧭 Explore Read Mapping of CGC

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