Cluster: HRGMv2_0429_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0429
- CGC Family ID: CGCFAM_00241
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0429_1 | HRGMv2_0429_1_256 | 299439 | 300782 | - | 2.A.2.3.5 |
| CAZyme | HRGMv2_0429_1 | HRGMv2_0429_1_257 | 300893 | 303331 | - | GH2 |
| CAZyme | HRGMv2_0429_1 | HRGMv2_0429_1_258 | 303562 | 304731 | - | GH130_1 |
| CAZyme | HRGMv2_0429_1 | HRGMv2_0429_1_259 | 304740 | 305819 | - | GH26 |
| CAZyme | HRGMv2_0429_1 | HRGMv2_0429_1_260 | 305903 | 307231 | - | CE7 |
| NULL(UNKNOWN) | HRGMv2_0429_1 | HRGMv2_0429_1_261 | 307273 | 307626 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0429_1 | HRGMv2_0429_1_262 | 308290 | 311520 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0429_1_256
Type: TC
Location: 299439 - 300782 (-)
Type: TC
Location: 299439 - 300782 (-)
Gene ID: HRGMv2_0429_1_257
Type: CAZyme
Location: 300893 - 303331 (-)
Type: CAZyme
Location: 300893 - 303331 (-)
Gene ID: HRGMv2_0429_1_258
Type: CAZyme
Location: 303562 - 304731 (-)
Type: CAZyme
Location: 303562 - 304731 (-)
Gene ID: HRGMv2_0429_1_259
Type: CAZyme
Location: 304740 - 305819 (-)
Type: CAZyme
Location: 304740 - 305819 (-)
Gene ID: HRGMv2_0429_1_260
Type: CAZyme
Location: 305903 - 307231 (-)
Type: CAZyme
Location: 305903 - 307231 (-)
Gene ID: HRGMv2_0429_1_261
Type:
Location: 307273 - 307626 (-)
Type:
Location: 307273 - 307626 (-)
Gene ID: HRGMv2_0429_1_262
Type: TC
Location: 308290 - 311520 (+)
Type: TC
Location: 308290 - 311520 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900548535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.