dbCAN Logo

Genome Details

Selected Rep_genome_ID: HRGMv2_0285
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp000436035
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR010240 3,372,453 95.44% 1.86% China Asia CGMR
GH132_78 3,960,389 98.14% 2.48% NA Africa H3AfricaPhase2
HRGMv2_0285 3,668,012 98.58% 0.281% Ethiopia Africa HRGM
MGYG000000695 3,484,843 98.14% 0.56% Kazakhstan Asia UHGG
SPMP22_bin.64 3,341,845 96.36% 0.28% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0285_CGC5 CGCFAM_00031 Yes 10 4 pectin/galactan
HRGMv2_0285_CGC3 CGCFAM_00044 Yes 19 6 beta-mannan/xylan/beta-glucan
HRGMv2_0285_CGC45 CGCFAM_00048 Yes 8 3
HRGMv2_0285_CGC10 CGCFAM_00049 Yes 5 1
HRGMv2_0285_CGC8 CGCFAM_00082 Yes 10 4 beta-mannan
HRGMv2_0285_CGC13 CGCFAM_00101 Yes 11 6 beta-glucan
HRGMv2_0285_CGC22 CGCFAM_00108 Yes 7 3 pectin
HRGMv2_0285_CGC41 CGCFAM_00181 Yes 7 1
HRGMv2_0285_CGC24 CGCFAM_00186 Yes 8 4
HRGMv2_0285_CGC47 CGCFAM_00221 Yes 5 2
HRGMv2_0285_CGC20 CGCFAM_00238 Yes 18 6 xylan
HRGMv2_0285_CGC42 CGCFAM_00241 Yes 6 3
HRGMv2_0285_CGC38 CGCFAM_00352 Yes 6 1
HRGMv2_0285_CGC14 CGCFAM_00478 Yes 4 1
HRGMv2_0285_CGC34 CGCFAM_00523 Yes 4 1
HRGMv2_0285_CGC1 CGCFAM_00551 Yes 4 1
HRGMv2_0285_CGC23 CGCFAM_00582 Yes 8 4 arabinogalactan
HRGMv2_0285_CGC29 CGCFAM_00603 Yes 7 1
HRGMv2_0285_CGC18 CGCFAM_00779 Yes 4 1
HRGMv2_0285_CGC31 CGCFAM_00900 Yes 6 3
HRGMv2_0285_CGC25 CGCFAM_01121 Yes 3 1
HRGMv2_0285_CGC49 CGCFAM_01338 Yes 7 2
HRGMv2_0285_CGC21 CGCFAM_01415 Yes 5 2
HRGMv2_0285_CGC30 CGCFAM_01477 Yes 12 6
HRGMv2_0285_CGC39 CGCFAM_01566 Yes 3 1
Top CAZyme Families