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Cluster: HRGMv2_0285_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0285_21 HRGMv2_0285_21_36 37061 38164 - 3.A.2.1.3
NULL(UNKNOWN) HRGMv2_0285_21 HRGMv2_0285_21_37 38180 38608 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0285_21 HRGMv2_0285_21_38 38629 38868 - ATP-synt_DE_N
TC HRGMv2_0285_21 HRGMv2_0285_21_39 38890 40416 - 3.A.2.1.2
pfam HRGMv2_0285_21 HRGMv2_0285_21_40 40655 41632 - PFK
TC HRGMv2_0285_21 HRGMv2_0285_21_41 41791 43230 - 2.A.62.1.3
CAZyme HRGMv2_0285_21 HRGMv2_0285_21_42 43396 44421 - GT2
Gene ID: HRGMv2_0285_21_36
Type: TC
Location: 37061 - 38164 (-)
Gene ID: HRGMv2_0285_21_37
Type:
Location: 38180 - 38608 (-)
Gene ID: HRGMv2_0285_21_38
Type: pfam
Location: 38629 - 38868 (-)
Gene ID: HRGMv2_0285_21_39
Type: TC
Location: 38890 - 40416 (-)
Gene ID: HRGMv2_0285_21_40
Type: pfam
Location: 40655 - 41632 (-)
Gene ID: HRGMv2_0285_21_41
Type: TC
Location: 41791 - 43230 (-)
Gene ID: HRGMv2_0285_21_42
Type: CAZyme
Location: 43396 - 44421 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0285_21_41 vegetarian > vegan 2.08347 0.00409

🧭 Explore Read Mapping of CGC

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