Cluster: HRGMv2_0285_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0285
- CGC Family ID: CGCFAM_00241
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0285_24 | HRGMv2_0285_24_10 | 9649 | 10992 | - | 2.A.2.3.5 |
| CAZyme | HRGMv2_0285_24 | HRGMv2_0285_24_11 | 11197 | 12369 | - | GH130_1 |
| CAZyme | HRGMv2_0285_24 | HRGMv2_0285_24_12 | 12417 | 13532 | - | GH26 |
| CAZyme | HRGMv2_0285_24 | HRGMv2_0285_24_13 | 13583 | 14908 | - | CE7 |
| NULL(UNKNOWN) | HRGMv2_0285_24 | HRGMv2_0285_24_14 | 14958 | 15083 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0285_24 | HRGMv2_0285_24_15 | 15703 | 19008 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0285_24_10
Type: TC
Location: 9649 - 10992 (-)
Type: TC
Location: 9649 - 10992 (-)
Gene ID: HRGMv2_0285_24_11
Type: CAZyme
Location: 11197 - 12369 (-)
Type: CAZyme
Location: 11197 - 12369 (-)
Gene ID: HRGMv2_0285_24_12
Type: CAZyme
Location: 12417 - 13532 (-)
Type: CAZyme
Location: 12417 - 13532 (-)
Gene ID: HRGMv2_0285_24_13
Type: CAZyme
Location: 13583 - 14908 (-)
Type: CAZyme
Location: 13583 - 14908 (-)
Gene ID: HRGMv2_0285_24_14
Type:
Location: 14958 - 15083 (+)
Type:
Location: 14958 - 15083 (+)
Gene ID: HRGMv2_0285_24_15
Type: TC
Location: 15703 - 19008 (+)
Type: TC
Location: 15703 - 19008 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0285_24_15 | vegetarian > vegan | 1.65748 | 0.00409 |