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Cluster: HRGMv2_0285_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0285_3 HRGMv2_0285_3_43 61827 63056 + GH5_4
TC HRGMv2_0285_3 HRGMv2_0285_3_44 63109 66291 + 1.B.14.6.2
TC HRGMv2_0285_3 HRGMv2_0285_3_45 66348 68126 + 8.A.46.2.2
NULL(UNKNOWN) HRGMv2_0285_3 HRGMv2_0285_3_46 68216 69463 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0285_3 HRGMv2_0285_3_47 69516 71849 + GH3
NULL(UNKNOWN) HRGMv2_0285_3 HRGMv2_0285_3_48 71916 72122 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0285_3 HRGMv2_0285_3_49 72145 75576 + GH5_4
TF HRGMv2_0285_3 HRGMv2_0285_3_50 75881 77311 + 0040266
NULL(UNKNOWN) HRGMv2_0285_3 HRGMv2_0285_3_51 77295 77714 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0285_3 HRGMv2_0285_3_52 77824 80319 - GH94
Gene ID: HRGMv2_0285_3_43
Type: CAZyme
Location: 61827 - 63056 (+)
Gene ID: HRGMv2_0285_3_44
Type: TC
Location: 63109 - 66291 (+)
Gene ID: HRGMv2_0285_3_45
Type: TC
Location: 66348 - 68126 (+)
Gene ID: HRGMv2_0285_3_46
Type:
Location: 68216 - 69463 (+)
Gene ID: HRGMv2_0285_3_47
Type: CAZyme
Location: 69516 - 71849 (+)
Gene ID: HRGMv2_0285_3_48
Type:
Location: 71916 - 72122 (+)
Gene ID: HRGMv2_0285_3_49
Type: CAZyme
Location: 72145 - 75576 (+)
Gene ID: HRGMv2_0285_3_50
Type: TF
Location: 75881 - 77311 (+)
Gene ID: HRGMv2_0285_3_51
Type:
Location: 77295 - 77714 (-)
Gene ID: HRGMv2_0285_3_52
Type: CAZyme
Location: 77824 - 80319 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0285_3_45 vegetarian > omnivore 1.05875 0.01622
HRGMv2_0285_3_50 vegetarian > omnivore 1.35499 0.01622
HRGMv2_0285_3_50 vegetarian > vegan 2.84771 0.00409

🧭 Explore Read Mapping of CGC

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