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Cluster: HRGMv2_0285_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0285_38 HRGMv2_0285_38_7 5470 6759 + CE19
NULL(UNKNOWN) HRGMv2_0285_38 HRGMv2_0285_38_8 6962 7069 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0285_38 HRGMv2_0285_38_9 7018 8355 - DUF3843
TC HRGMv2_0285_38 HRGMv2_0285_38_10 8642 10588 + 3.A.18.1.1
NULL(UNKNOWN) HRGMv2_0285_38 HRGMv2_0285_38_11 10908 11051 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0285_38 HRGMv2_0285_38_12 11048 12175 + AAA_14 | DUF4143
CAZyme HRGMv2_0285_38 HRGMv2_0285_38_13 12314 15223 + GH2
Gene ID: HRGMv2_0285_38_7
Type: CAZyme
Location: 5470 - 6759 (+)
Gene ID: HRGMv2_0285_38_8
Type:
Location: 6962 - 7069 (+)
Gene ID: HRGMv2_0285_38_9
Type: pfam
Location: 7018 - 8355 (-)
Gene ID: HRGMv2_0285_38_10
Type: TC
Location: 8642 - 10588 (+)
Gene ID: HRGMv2_0285_38_11
Type:
Location: 10908 - 11051 (+)
Gene ID: HRGMv2_0285_38_12
Type: pfam
Location: 11048 - 12175 (+)
Gene ID: HRGMv2_0285_38_13
Type: CAZyme
Location: 12314 - 15223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0285_38_12 vegetarian > omnivore 1.45014 0.01622
HRGMv2_0285_38_12 vegetarian > vegan 3.51332 0.00409

🧭 Explore Read Mapping of CGC

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