Cluster: HRGMv2_0285_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0285
- CGC Family ID: CGCFAM_01121
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0285_11 | HRGMv2_0285_11_22 | 22798 | 23688 | - | GT2 |
| sulfatase | HRGMv2_0285_11 | HRGMv2_0285_11_23 | 23685 | 24293 | - | S1_7 |
| TC | HRGMv2_0285_11 | HRGMv2_0285_11_24 | 24293 | 25246 | - | 2.A.115.1.5 |
Gene ID: HRGMv2_0285_11_22
Type: CAZyme
Location: 22798 - 23688 (-)
Type: CAZyme
Location: 22798 - 23688 (-)
Gene ID: HRGMv2_0285_11_23
Type: sulfatase
Location: 23685 - 24293 (-)
Type: sulfatase
Location: 23685 - 24293 (-)
Gene ID: HRGMv2_0285_11_24
Type: TC
Location: 24293 - 25246 (-)
Type: TC
Location: 24293 - 25246 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0285_11_23 | vegetarian > vegan | 1.38901 | 0.00409 |