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Genome Details

Selected Rep_genome_ID: HRGMv2_0187
Total Genomes Found: 37
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Family
UBA932
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
BF075_bin.52 3,257,594 93.81% 0.48% NA Africa H3AfricaPhase2
C104.bin_24 3,778,062 94.6% 1.11% China(Inner Mongolia) Asia IMGG
CGMR069102 3,473,013 95.08% 1.19% China Asia CGMR
GCA_021616595.1_ASM2161659v1_genomic 3,813,457 91.11% 4.05% NA Africa H3AfricaPhase1
GCA_021617455.1_ASM2161745v1_genomic 3,473,585 94.6% 1.19% NA Africa H3AfricaPhase1
GCA_021617845.1_ASM2161784v1_genomic 3,095,803 93.65% 1.43% NA Africa H3AfricaPhase1
GCA_021618745.1_ASM2161874v1_genomic 3,545,070 94.6% 2.3% NA Africa H3AfricaPhase1
GCA_021619535.1_ASM2161953v1_genomic 3,504,253 94.6% 1.11% NA Africa H3AfricaPhase1
GCA_021619725.1_ASM2161972v1_genomic 3,686,484 94.13% 4.76% NA Africa H3AfricaPhase1
GCA_021620345.1_ASM2162034v1_genomic 3,249,796 90.24% 3.42% NA Africa H3AfricaPhase1
GCA_021620905.1_ASM2162090v1_genomic 3,291,245 92.7% 2.06% NA Africa H3AfricaPhase1
GCA_021621025.1_ASM2162102v1_genomic 3,312,967 92.7% 1.19% NA Africa H3AfricaPhase1
GCA_021621655.1_ASM2162165v1_genomic 3,486,196 94.6% 2.25% NA Africa H3AfricaPhase1
GCA_021622305.1_ASM2162230v1_genomic 3,607,816 95.08% 2.3% NA Africa H3AfricaPhase1
GCA_021624225.1_ASM2162422v1_genomic 3,671,372 94.6% 1.83% NA Africa H3AfricaPhase1
GCA_021624495.1_ASM2162449v1_genomic 3,390,932 91.27% 2.78% NA Africa H3AfricaPhase1
GCA_021626465.1_ASM2162646v1_genomic 3,455,821 94.6% 3.41% NA Africa H3AfricaPhase1
GCA_021627385.1_ASM2162738v1_genomic 3,224,297 93.65% 1.9% NA Africa H3AfricaPhase1
GCA_021631405.1_ASM2163140v1_genomic 3,302,011 93.49% 2.14% NA Africa H3AfricaPhase1
GCA_021632505.1_ASM2163250v1_genomic 3,474,496 95.08% 2.14% NA Africa H3AfricaPhase1
GCA_021632585.1_ASM2163258v1_genomic 3,218,244 93.17% 1.83% NA Africa H3AfricaPhase1
GCA_021632765.1_ASM2163276v1_genomic 3,569,805 95.08% 2.3% NA Africa H3AfricaPhase1
GCA_021633795.1_ASM2163379v1_genomic 3,433,450 93.81% 2.3% NA Africa H3AfricaPhase1
GCA_021634605.1_ASM2163460v1_genomic 3,244,329 93.17% 1.27% NA Africa H3AfricaPhase1
GCA_021635605.1_ASM2163560v1_genomic 3,601,450 93.17% 1.67% NA Africa H3AfricaPhase1
GCA_021636125.1_ASM2163612v1_genomic 3,261,027 93.65% 3.22% NA Africa H3AfricaPhase1
GCA_021638555.1_ASM2163855v1_genomic 3,095,877 91.27% 1.19% NA Africa H3AfricaPhase1
GCA_021640025.1_ASM2164002v1_genomic 3,637,727 95.08% 1.11% NA Africa H3AfricaPhase1
GCA_021640405.1_ASM2164040v1_genomic 3,430,054 94.6% 1.83% NA Africa H3AfricaPhase1
GCA_021640725.1_ASM2164072v1_genomic 3,476,809 93.41% 2.3% NA Africa H3AfricaPhase1
GCA_021641135.1_ASM2164113v1_genomic 3,371,020 94.6% 1.67% NA Africa H3AfricaPhase1
GCA_021641165.1_ASM2164116v1_genomic 3,307,033 92.22% 2.38% NA Africa H3AfricaPhase1
HRGMv2_0187 3,278,308 95.07% 0.476% Tanzania Africa HRGM
MGYG000000606 3,291,011 94.13% 0.63% Madagascar Africa UHGG
Rep_51 3,519,133 95.0794% 1.5873% NA NA WIS
SPMP31_bin.3 3,317,595 94.6% 1.35% Singapore Asia SPMP
VatanenT_2016_SRR4408017_bin.6 3,082,423 94.28% 1.349% Estonia Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0187_CGC16 CGCFAM_00001 Yes 10 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0187_CGC17 CGCFAM_00001 Yes 6 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0187_CGC30 CGCFAM_00005 Yes 12 7
HRGMv2_0187_CGC1 CGCFAM_00071 Yes 9 3
HRGMv2_0187_CGC39 CGCFAM_00128 Yes 10 2
HRGMv2_0187_CGC43 CGCFAM_00150 Yes 4 1
HRGMv2_0187_CGC24 CGCFAM_00249 Yes 8 1
HRGMv2_0187_CGC27 CGCFAM_00260 Yes 7 1
HRGMv2_0187_CGC8 CGCFAM_00404 Yes 15 6
HRGMv2_0187_CGC6 CGCFAM_00436 Yes 8 1
HRGMv2_0187_CGC33 CGCFAM_00439 Yes 6 2 host glycan
HRGMv2_0187_CGC12 CGCFAM_00492 Yes 3 1
HRGMv2_0187_CGC35 CGCFAM_00495 Yes 8 1
HRGMv2_0187_CGC45 CGCFAM_00639 Yes 7 1
HRGMv2_0187_CGC21 CGCFAM_01213 Yes 9 1
HRGMv2_0187_CGC4 CGCFAM_01287 Yes 3 1
HRGMv2_0187_CGC36 CGCFAM_02145 Yes 4 1
HRGMv2_0187_CGC19 CGCFAM_03607 Yes 8 1
HRGMv2_0187_CGC15 CGCFAM_03608 Yes 5 1
HRGMv2_0187_CGC44 CGCFAM_05576 Yes 5 1
HRGMv2_0187_CGC13 CGCFAM_05844 Yes 4 1
HRGMv2_0187_CGC18 CGCFAM_07860 Yes 3 1
HRGMv2_0187_CGC14 CGCFAM_09317 Yes 7 2
HRGMv2_0187_CGC2 CGCFAM_09529 Yes 5 2
HRGMv2_0187_CGC22 CGCFAM_09530 Yes 5 2
Top CAZyme Families