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Cluster: HRGMv2_0187_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0187_5 HRGMv2_0187_5_40 60689 62944 - GH3
CAZyme HRGMv2_0187_5 HRGMv2_0187_5_41 62976 65156 - GH144
TC HRGMv2_0187_5 HRGMv2_0187_5_42 65527 68514 + 1.B.14.6.1
pfam HRGMv2_0187_5 HRGMv2_0187_5_43 68533 70035 + SusD_RagB | SusD-like_2 | SusD-like_3
CAZyme HRGMv2_0187_5 HRGMv2_0187_5_44 70054 71505 + GH144
CAZyme HRGMv2_0187_5 HRGMv2_0187_5_45 71495 74005 + GH31_1
pfam HRGMv2_0187_5 HRGMv2_0187_5_46 73990 75051 + Metallophos
pfam HRGMv2_0187_5 HRGMv2_0187_5_47 75838 79197 + DUF4988 | CFSR
TC HRGMv2_0187_5 HRGMv2_0187_5_48 79284 81839 - 2.A.21.3.7
pfam HRGMv2_0187_5 HRGMv2_0187_5_49 82052 82963 + DHDPS
TC HRGMv2_0187_5 HRGMv2_0187_5_50 82984 86256 + 1.B.14.6.1
TC HRGMv2_0187_5 HRGMv2_0187_5_51 86269 87729 + 8.A.46.3.3
CAZyme HRGMv2_0187_5 HRGMv2_0187_5_52 87746 88885 + GH33
pfam HRGMv2_0187_5 HRGMv2_0187_5_53 88894 90459 + PKD | Laminin_G_3
CAZyme HRGMv2_0187_5 HRGMv2_0187_5_54 90496 92457 + GH33
Gene ID: HRGMv2_0187_5_40
Type: CAZyme
Location: 60689 - 62944 (-)
Gene ID: HRGMv2_0187_5_41
Type: CAZyme
Location: 62976 - 65156 (-)
Gene ID: HRGMv2_0187_5_42
Type: TC
Location: 65527 - 68514 (+)
Gene ID: HRGMv2_0187_5_43
Type: pfam
Location: 68533 - 70035 (+)
Gene ID: HRGMv2_0187_5_44
Type: CAZyme
Location: 70054 - 71505 (+)
Gene ID: HRGMv2_0187_5_45
Type: CAZyme
Location: 71495 - 74005 (+)
Gene ID: HRGMv2_0187_5_46
Type: pfam
Location: 73990 - 75051 (+)
Gene ID: HRGMv2_0187_5_47
Type: pfam
Location: 75838 - 79197 (+)
Gene ID: HRGMv2_0187_5_48
Type: TC
Location: 79284 - 81839 (-)
Gene ID: HRGMv2_0187_5_49
Type: pfam
Location: 82052 - 82963 (+)
Gene ID: HRGMv2_0187_5_50
Type: TC
Location: 82984 - 86256 (+)
Gene ID: HRGMv2_0187_5_51
Type: TC
Location: 86269 - 87729 (+)
Gene ID: HRGMv2_0187_5_52
Type: CAZyme
Location: 87746 - 88885 (+)
Gene ID: HRGMv2_0187_5_53
Type: pfam
Location: 88894 - 90459 (+)
Gene ID: HRGMv2_0187_5_54
Type: CAZyme
Location: 90496 - 92457 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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