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Cluster: HRGMv2_0187_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_45 HRGMv2_0187_45_8 5513 7417 - 1.A.33.1.2
NULL(UNKNOWN) HRGMv2_0187_45 HRGMv2_0187_45_9 8083 9069 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0187_45 HRGMv2_0187_45_10 9754 12156 - OMP_b-brl_3
CAZyme HRGMv2_0187_45 HRGMv2_0187_45_11 12198 15254 - GH13 | GH13_46
CAZyme HRGMv2_0187_45 HRGMv2_0187_45_12 15270 17273 - GH13_36
pfam HRGMv2_0187_45 HRGMv2_0187_45_13 17351 19699 - SusE | SusF_SusE
TC HRGMv2_0187_45 HRGMv2_0187_45_14 19706 21310 - 8.A.46.1.1
TC HRGMv2_0187_45 HRGMv2_0187_45_15 21324 24359 - 1.B.14.6.1
TC HRGMv2_0187_45 HRGMv2_0187_45_16 24381 25715 - 2.A.2.6.2
TC HRGMv2_0187_45 HRGMv2_0187_45_17 25913 27283 + 8.A.59.2.1
Gene ID: HRGMv2_0187_45_8
Type: TC
Location: 5513 - 7417 (-)
Gene ID: HRGMv2_0187_45_9
Type:
Location: 8083 - 9069 (-)
Gene ID: HRGMv2_0187_45_10
Type: pfam
Location: 9754 - 12156 (-)
Gene ID: HRGMv2_0187_45_11
Type: CAZyme
Location: 12198 - 15254 (-)
Gene ID: HRGMv2_0187_45_12
Type: CAZyme
Location: 15270 - 17273 (-)
Gene ID: HRGMv2_0187_45_13
Type: pfam
Location: 17351 - 19699 (-)
Gene ID: HRGMv2_0187_45_14
Type: TC
Location: 19706 - 21310 (-)
Gene ID: HRGMv2_0187_45_15
Type: TC
Location: 21324 - 24359 (-)
Gene ID: HRGMv2_0187_45_16
Type: TC
Location: 24381 - 25715 (-)
Gene ID: HRGMv2_0187_45_17
Type: TC
Location: 25913 - 27283 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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