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Cluster: HRGMv2_0187_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_23 HRGMv2_0187_23_20 21165 22232 + 3.A.1.132.3
pfam HRGMv2_0187_23 HRGMv2_0187_23_21 22460 23869 - FAD_binding_2 | GIDA | FAD_oxidored
TC HRGMv2_0187_23 HRGMv2_0187_23_22 23901 26636 - 9.B.144.1.4
CAZyme HRGMv2_0187_23 HRGMv2_0187_23_23 26649 27977 - GT4
pfam HRGMv2_0187_23 HRGMv2_0187_23_24 28127 29308 + Acetyltransf_1
pfam HRGMv2_0187_23 HRGMv2_0187_23_25 29561 32206 + MutS_V | MutS_I | MutS_II | MutS_IV | MutS_III
TC HRGMv2_0187_23 HRGMv2_0187_23_26 32203 33624 - 2.A.33.1.1
Gene ID: HRGMv2_0187_23_20
Type: TC
Location: 21165 - 22232 (+)
Gene ID: HRGMv2_0187_23_21
Type: pfam
Location: 22460 - 23869 (-)
Gene ID: HRGMv2_0187_23_22
Type: TC
Location: 23901 - 26636 (-)
Gene ID: HRGMv2_0187_23_23
Type: CAZyme
Location: 26649 - 27977 (-)
Gene ID: HRGMv2_0187_23_24
Type: pfam
Location: 28127 - 29308 (+)
Gene ID: HRGMv2_0187_23_25
Type: pfam
Location: 29561 - 32206 (+)
Gene ID: HRGMv2_0187_23_26
Type: TC
Location: 32203 - 33624 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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