Cluster: HRGMv2_0187_CGC45
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0187
- CGC Family ID: CGCFAM_00639
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0187_76 | HRGMv2_0187_76_1 | 204 | 1151 | + | 1.A.35.1.1 |
| pfam | HRGMv2_0187_76 | HRGMv2_0187_76_2 | 1287 | 3143 | + | S1 | S1 | S1 | S1 | S1 | S1 | S1_RRP5 |
| sulfatase | HRGMv2_0187_76 | HRGMv2_0187_76_3 | 3147 | 4088 | + | S4 |
| CAZyme | HRGMv2_0187_76 | HRGMv2_0187_76_4 | 4223 | 5344 | + | GH73 |
| pfam | HRGMv2_0187_76 | HRGMv2_0187_76_5 | 5344 | 6372 | + | YceG |
| NULL(UNKNOWN) | HRGMv2_0187_76 | HRGMv2_0187_76_6 | 6500 | 6763 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0187_76 | HRGMv2_0187_76_7 | 6857 | 8107 | - | 3.A.24.1.1 |
Gene ID: HRGMv2_0187_76_1
Type: TC
Location: 204 - 1151 (+)
Type: TC
Location: 204 - 1151 (+)
Gene ID: HRGMv2_0187_76_2
Type: pfam
Location: 1287 - 3143 (+)
Type: pfam
Location: 1287 - 3143 (+)
Gene ID: HRGMv2_0187_76_3
Type: sulfatase
Location: 3147 - 4088 (+)
Type: sulfatase
Location: 3147 - 4088 (+)
Gene ID: HRGMv2_0187_76_4
Type: CAZyme
Location: 4223 - 5344 (+)
Type: CAZyme
Location: 4223 - 5344 (+)
Gene ID: HRGMv2_0187_76_5
Type: pfam
Location: 5344 - 6372 (+)
Type: pfam
Location: 5344 - 6372 (+)
Gene ID: HRGMv2_0187_76_6
Type:
Location: 6500 - 6763 (-)
Type:
Location: 6500 - 6763 (-)
Gene ID: HRGMv2_0187_76_7
Type: TC
Location: 6857 - 8107 (-)
Type: TC
Location: 6857 - 8107 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000433355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.