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Cluster: HRGMv2_0187_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_9 HRGMv2_0187_9_52 49854 51170 + 2.A.1.14.25
pfam HRGMv2_0187_9 HRGMv2_0187_9_53 51183 52556 + FAD_binding_2 | FAD_oxidored | NAD_binding_8
pfam HRGMv2_0187_9 HRGMv2_0187_9_54 52591 53511 + Exo_endo_phos
CAZyme HRGMv2_0187_9 HRGMv2_0187_9_55 53677 56943 - GH2
pfam HRGMv2_0187_9 HRGMv2_0187_9_56 57092 57808 - YhhN
pfam HRGMv2_0187_9 HRGMv2_0187_9_57 57859 58326 - Vsr
CAZyme HRGMv2_0187_9 HRGMv2_0187_9_58 58540 60543 - GH97
Gene ID: HRGMv2_0187_9_52
Type: TC
Location: 49854 - 51170 (+)
Gene ID: HRGMv2_0187_9_53
Type: pfam
Location: 51183 - 52556 (+)
Gene ID: HRGMv2_0187_9_54
Type: pfam
Location: 52591 - 53511 (+)
Gene ID: HRGMv2_0187_9_55
Type: CAZyme
Location: 53677 - 56943 (-)
Gene ID: HRGMv2_0187_9_56
Type: pfam
Location: 57092 - 57808 (-)
Gene ID: HRGMv2_0187_9_57
Type: pfam
Location: 57859 - 58326 (-)
Gene ID: HRGMv2_0187_9_58
Type: CAZyme
Location: 58540 - 60543 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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