Cluster: HRGMv2_0187_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: HRGMv2_0187
- CGC Family ID: CGCFAM_00439
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0187_28 | HRGMv2_0187_28_9 | 10080 | 12947 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0187_28 | HRGMv2_0187_28_10 | 12960 | 14831 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0187_28 | HRGMv2_0187_28_11 | 14831 | 18010 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0187_28 | HRGMv2_0187_28_12 | 18022 | 19599 | - | BACON | BACON | BACON | BACON_2 | BACON_2 |
| CAZyme | HRGMv2_0187_28 | HRGMv2_0187_28_13 | 19663 | 21663 | - | PL42 |
| CAZyme | HRGMv2_0187_28 | HRGMv2_0187_28_14 | 21671 | 23170 | - | PL42 |
Gene ID: HRGMv2_0187_28_9
Type: TC
Location: 10080 - 12947 (-)
Type: TC
Location: 10080 - 12947 (-)
Gene ID: HRGMv2_0187_28_10
Type: pfam
Location: 12960 - 14831 (-)
Type: pfam
Location: 12960 - 14831 (-)
Gene ID: HRGMv2_0187_28_11
Type: TC
Location: 14831 - 18010 (-)
Type: TC
Location: 14831 - 18010 (-)
Gene ID: HRGMv2_0187_28_12
Type: pfam
Location: 18022 - 19599 (-)
Type: pfam
Location: 18022 - 19599 (-)
Gene ID: HRGMv2_0187_28_13
Type: CAZyme
Location: 19663 - 21663 (-)
Type: CAZyme
Location: 19663 - 21663 (-)
Gene ID: HRGMv2_0187_28_14
Type: CAZyme
Location: 21671 - 23170 (-)
Type: CAZyme
Location: 21671 - 23170 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000433355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.