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Cluster: HRGMv2_0187_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_1 HRGMv2_0187_1_61 63356 64099 + 3.A.1.105.15
TC HRGMv2_0187_1 HRGMv2_0187_1_62 64101 65207 + 3.A.1.105.15
TC HRGMv2_0187_1 HRGMv2_0187_1_63 65212 66330 + 3.A.1.105.15
CAZyme HRGMv2_0187_1 HRGMv2_0187_1_64 66340 67086 + GT2
TC HRGMv2_0187_1 HRGMv2_0187_1_65 67098 67772 + 2.A.123.4.1
CAZyme HRGMv2_0187_1 HRGMv2_0187_1_66 67738 69462 + GT83
pfam HRGMv2_0187_1 HRGMv2_0187_1_67 69904 70950 + PDDEXK_2
NULL(UNKNOWN) HRGMv2_0187_1 HRGMv2_0187_1_68 71020 71118 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0187_1 HRGMv2_0187_1_69 71336 72628 + GT83
Gene ID: HRGMv2_0187_1_61
Type: TC
Location: 63356 - 64099 (+)
Gene ID: HRGMv2_0187_1_62
Type: TC
Location: 64101 - 65207 (+)
Gene ID: HRGMv2_0187_1_63
Type: TC
Location: 65212 - 66330 (+)
Gene ID: HRGMv2_0187_1_64
Type: CAZyme
Location: 66340 - 67086 (+)
Gene ID: HRGMv2_0187_1_65
Type: TC
Location: 67098 - 67772 (+)
Gene ID: HRGMv2_0187_1_66
Type: CAZyme
Location: 67738 - 69462 (+)
Gene ID: HRGMv2_0187_1_67
Type: pfam
Location: 69904 - 70950 (+)
Gene ID: HRGMv2_0187_1_68
Type:
Location: 71020 - 71118 (+)
Gene ID: HRGMv2_0187_1_69
Type: CAZyme
Location: 71336 - 72628 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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