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Cluster: HRGMv2_0187_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0187_31 HRGMv2_0187_31_2 1166 2815 - GH20
TC HRGMv2_0187_31 HRGMv2_0187_31_3 2882 3484 - 2.A.51.1.6
TC HRGMv2_0187_31 HRGMv2_0187_31_4 3477 4067 - 2.A.51.1.6
TC HRGMv2_0187_31 HRGMv2_0187_31_5 4064 4738 - 9.B.158.1.1
NULL(UNKNOWN) HRGMv2_0187_31 HRGMv2_0187_31_6 5443 5739 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0187_31 HRGMv2_0187_31_7 5949 7709 - SLFN_AlbA_2 | HATPase_c_4
TC HRGMv2_0187_31 HRGMv2_0187_31_8 7850 8347 - 9.B.158.1.1
TC HRGMv2_0187_31 HRGMv2_0187_31_9 8873 12061 + 1.B.14.6.2
Gene ID: HRGMv2_0187_31_2
Type: CAZyme
Location: 1166 - 2815 (-)
Gene ID: HRGMv2_0187_31_3
Type: TC
Location: 2882 - 3484 (-)
Gene ID: HRGMv2_0187_31_4
Type: TC
Location: 3477 - 4067 (-)
Gene ID: HRGMv2_0187_31_5
Type: TC
Location: 4064 - 4738 (-)
Gene ID: HRGMv2_0187_31_6
Type:
Location: 5443 - 5739 (+)
Gene ID: HRGMv2_0187_31_7
Type: pfam
Location: 5949 - 7709 (-)
Gene ID: HRGMv2_0187_31_8
Type: TC
Location: 7850 - 8347 (-)
Gene ID: HRGMv2_0187_31_9
Type: TC
Location: 8873 - 12061 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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