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Cluster: HRGMv2_0187_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_18 HRGMv2_0187_18_21 19918 23058 + 2.A.6.3.6
TC HRGMv2_0187_18 HRGMv2_0187_18_22 23087 26221 + 2.A.6.2.33
NULL(UNKNOWN) HRGMv2_0187_18 HRGMv2_0187_18_23 26547 27080 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0187_18 HRGMv2_0187_18_24 28191 29279 + DUF5128
TC HRGMv2_0187_18 HRGMv2_0187_18_25 29452 30981 + 9.A.25.1.1
CAZyme HRGMv2_0187_18 HRGMv2_0187_18_26 31021 32364 + GH177
pfam HRGMv2_0187_18 HRGMv2_0187_18_27 32371 33279 + AP_endonuc_2
pfam HRGMv2_0187_18 HRGMv2_0187_18_28 33279 34142 + ResB
TC HRGMv2_0187_18 HRGMv2_0187_18_29 34139 35077 + 9.B.14.3.3
Gene ID: HRGMv2_0187_18_21
Type: TC
Location: 19918 - 23058 (+)
Gene ID: HRGMv2_0187_18_22
Type: TC
Location: 23087 - 26221 (+)
Gene ID: HRGMv2_0187_18_23
Type:
Location: 26547 - 27080 (+)
Gene ID: HRGMv2_0187_18_24
Type: pfam
Location: 28191 - 29279 (+)
Gene ID: HRGMv2_0187_18_25
Type: TC
Location: 29452 - 30981 (+)
Gene ID: HRGMv2_0187_18_26
Type: CAZyme
Location: 31021 - 32364 (+)
Gene ID: HRGMv2_0187_18_27
Type: pfam
Location: 32371 - 33279 (+)
Gene ID: HRGMv2_0187_18_28
Type: pfam
Location: 33279 - 34142 (+)
Gene ID: HRGMv2_0187_18_29
Type: TC
Location: 34139 - 35077 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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