Cluster: HRGMv2_0187_CGC30
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0187
- CGC Family ID: CGCFAM_00005
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0187_26 | HRGMv2_0187_26_12 | 15695 | 16333 | - | 9.B.18.1.3 |
| CAZyme | HRGMv2_0187_26 | HRGMv2_0187_26_13 | 16383 | 17618 | - | GT4 |
| CAZyme | HRGMv2_0187_26 | HRGMv2_0187_26_14 | 18194 | 19429 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0187_26 | HRGMv2_0187_26_15 | 19437 | 19973 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0187_26 | HRGMv2_0187_26_16 | 19961 | 21187 | - | AAA_15 |
| CAZyme | HRGMv2_0187_26 | HRGMv2_0187_26_17 | 21255 | 22394 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0187_26 | HRGMv2_0187_26_18 | 22391 | 23689 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0187_26 | HRGMv2_0187_26_19 | 23701 | 24675 | - | GT2 |
| CAZyme | HRGMv2_0187_26 | HRGMv2_0187_26_20 | 24678 | 25409 | - | GT32 |
| pfam | HRGMv2_0187_26 | HRGMv2_0187_26_21 | 25406 | 26335 | - | Glycos_transf_2 |
| CAZyme | HRGMv2_0187_26 | HRGMv2_0187_26_22 | 26343 | 27350 | - | GT2 |
| CAZyme | HRGMv2_0187_26 | HRGMv2_0187_26_23 | 27347 | 28306 | - | GT2 |
Gene ID: HRGMv2_0187_26_12
Type: TC
Location: 15695 - 16333 (-)
Type: TC
Location: 15695 - 16333 (-)
Gene ID: HRGMv2_0187_26_13
Type: CAZyme
Location: 16383 - 17618 (-)
Type: CAZyme
Location: 16383 - 17618 (-)
Gene ID: HRGMv2_0187_26_14
Type: CAZyme
Location: 18194 - 19429 (-)
Type: CAZyme
Location: 18194 - 19429 (-)
Gene ID: HRGMv2_0187_26_15
Type:
Location: 19437 - 19973 (-)
Type:
Location: 19437 - 19973 (-)
Gene ID: HRGMv2_0187_26_16
Type: pfam
Location: 19961 - 21187 (-)
Type: pfam
Location: 19961 - 21187 (-)
Gene ID: HRGMv2_0187_26_17
Type: CAZyme
Location: 21255 - 22394 (-)
Type: CAZyme
Location: 21255 - 22394 (-)
Gene ID: HRGMv2_0187_26_18
Type:
Location: 22391 - 23689 (-)
Type:
Location: 22391 - 23689 (-)
Gene ID: HRGMv2_0187_26_19
Type: CAZyme
Location: 23701 - 24675 (-)
Type: CAZyme
Location: 23701 - 24675 (-)
Gene ID: HRGMv2_0187_26_20
Type: CAZyme
Location: 24678 - 25409 (-)
Type: CAZyme
Location: 24678 - 25409 (-)
Gene ID: HRGMv2_0187_26_21
Type: pfam
Location: 25406 - 26335 (-)
Type: pfam
Location: 25406 - 26335 (-)
Gene ID: HRGMv2_0187_26_22
Type: CAZyme
Location: 26343 - 27350 (-)
Type: CAZyme
Location: 26343 - 27350 (-)
Gene ID: HRGMv2_0187_26_23
Type: CAZyme
Location: 27347 - 28306 (-)
Type: CAZyme
Location: 27347 - 28306 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000433355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.