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Cluster: HRGMv2_0187_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_5 HRGMv2_0187_5_1 1 1071 - 3.A.1.105.15
TC HRGMv2_0187_5 HRGMv2_0187_5_2 1073 2182 - 3.A.1.105.4
TC HRGMv2_0187_5 HRGMv2_0187_5_3 2179 2925 - 3.A.1.105.4
TC HRGMv2_0187_5 HRGMv2_0187_5_4 2975 3901 - 3.A.1.105.6
TC HRGMv2_0187_5 HRGMv2_0187_5_5 3904 4821 - 3.A.1.105.15
pfam HRGMv2_0187_5 HRGMv2_0187_5_6 4818 6080 - OEP | OEP
STP HRGMv2_0187_5 HRGMv2_0187_5_7 6096 6752 - TetR_N
CAZyme HRGMv2_0187_5 HRGMv2_0187_5_8 6846 9335 + GH2
Gene ID: HRGMv2_0187_5_1
Type: TC
Location: 1 - 1071 (-)
Gene ID: HRGMv2_0187_5_2
Type: TC
Location: 1073 - 2182 (-)
Gene ID: HRGMv2_0187_5_3
Type: TC
Location: 2179 - 2925 (-)
Gene ID: HRGMv2_0187_5_4
Type: TC
Location: 2975 - 3901 (-)
Gene ID: HRGMv2_0187_5_5
Type: TC
Location: 3904 - 4821 (-)
Gene ID: HRGMv2_0187_5_6
Type: pfam
Location: 4818 - 6080 (-)
Gene ID: HRGMv2_0187_5_7
Type: STP
Location: 6096 - 6752 (-)
Gene ID: HRGMv2_0187_5_8
Type: CAZyme
Location: 6846 - 9335 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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